Avi K,
You are seeing what you want to see. Personally, I don’t mind the prayer for the Medinah, EXCEPT those words ????? ????? ???????
If you want to daven for Hashem to help the Jews of the Medinah then good, but no one knows Hashem’s plan for the Geulah. Maybe the beginning of the Geulah started when the Talmidai haGRA went to E”Y. Maybe at the beginning of Yeshivat Porat Yosef. Maybe it did not happen yet. None of us knows.